User profiles for R. Read

Randy J Read

- Verified email at cam.ac.uk - Cited by 122660

Robert Read

- Verified email at soton.ac.uk - Cited by 22057

[HTML][HTML] Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

…, RD Oeffner, BK Poon, MG Prisant, RJ Read… - … Section D: Structural …, 2019 - scripts.iucr.org
R work and R free values after refinement; R-factor plots show how the values change during
the refinement run. The distribution of R … While R factors are calculated in reciprocal space, …

The Phenix software for automated determination of macromolecular structures

…, AJ McCoy, NW Moriarty, RD Oeffner, RJ Read… - Methods, 2011 - Elsevier
… Since the inception of R free for model-to-data fit [66] and of What-If and ProCheck for model
… , and chemical reasonableness, and also lowering R and R free by small amounts. Such …

The graph isomorphism disease

RC Read, DG Corneil - Journal of graph theory, 1977 - Wiley Online Library
… The following theorem, attributed to R. Karp, establishes the algorithmic equivalence of the
graph … This conjecture has since been shown to be false, and R. Mathon [26] has produced …

Accurate prediction of protein structures and interactions using a three-track neural network

…, JE Burke, KC Garcia, NV Grishin, PD Adams, RJ Read… - Science, 2021 - science.org
DeepMind presented notably accurate predictions at the recent 14th Critical Assessment of
Structure Prediction (CASP14) conference. We explored network architectures that …

[HTML][HTML] Overview of the CCP4 suite and current developments

…, EA Potterton, HR Powell, RJ Read… - … Section D: Biological …, 2011 - scripts.iucr.org
The CCP4 (Collaborative Computational Project, Number 4) software suite is a collection of
programs and associated data and software libraries which can be used for macromolecular …

[HTML][HTML] PHENIX: a comprehensive Python-based system for macromolecular structure solution

…, NW Moriarty, R Oeffner, RJ Read… - … Section D: Biological …, 2010 - scripts.iucr.org
… D65, 297-300.] ) is a graphical tool that is designed to indicate the similarity of validation
parameters, such as free R value, for a particular structure compared with those deposited in the …

Crystallography & NMR system: A new software suite for macromolecular structure determination

…, M Nilges, NS Pannu, RJ Read… - … Section D: Biological …, 1998 - scripts.iucr.org
… The first section of the protocol consists of reading the various data structures. This is
followed by an initialization section for statistical analysis of average properties. A constant high- …

[HTML][HTML] Phaser crystallographic software

…, PD Adams, MD Winn, LC Storoni, RJ Read - Journal of applied …, 2007 - iucr.org
… when |r a,b | ≤ R and where r a,b = r a − r b , r a and r b are the coordinates of the atoms
a and b, R is the cut-off radius for considering the interaction (= 5 Ć by default), and C is the …

[HTML][HTML] PHENIX: building new software for automated crystallographic structure determination

…, TR Ioerger, AJ McCoy, NW Moriarty, RJ Read… - … Section D: Biological …, 2002 - iucr.org
Structural genomics seeks to expand rapidly the number of protein structures in order to
extract the maximum amount of information from genomic sequence databases. The advent of …

[HTML][HTML] Safety and immunogenicity of seven COVID-19 vaccines as a third dose (booster) following two doses of ChAdOx1 nCov-19 or BNT162b2 in the UK (COV …

…, A Sturdy, EC Thomson, S Todd, C Twelves, RC Read… - The Lancet, 2021 - thelancet.com
Background Few data exist on the comparative safety and immunogenicity of different
COVID-19 vaccines given as a third (booster) dose. To generate data to optimise selection of …