Extracellular superoxide dismutase (EC-SOD) gene mutations screening in a sample of Mediterranean population

Mutat Res. 2005 Oct 15;578(1-2):143-8. doi: 10.1016/j.mrfmmm.2005.04.001.

Abstract

The main role of superoxide dismutases (SODs) is to eliminate reactive oxygen species in cells and tissues. Extracellular SOD (EC-SOD/SOD3) is a major superoxide scavenger and it is located on cell surfaces and primarily in extracellular matrix, and binds heparan sulfates by its carboxyterminal portion. Human EC-SOD gene is located on chromosome 4 and comprises three exons and two introns. The SOD3 coding sequence is entirely located within exon 3 and has missense polymorphisms. The Arg213Gly mutation affects the function of the carboxyterminus and correlates with several diseases. In this work, we explored genetic variants within EC-SOD gene of subjects living in southern Italy. Four new variations were detected: one was silent mutation, while three were missense variations that give rise to amino acid substitutions at position 131 (F>C), 160 (V>L) and 202 (R>L) in the mature product. The Arg213Gly variant was not found. The missense mutations in the DNA of assayed 2400 chromosomes had frequencies of 5.34% for the F131C variation, 0.25% for the V160L variation and 0.84% for the R202L variation. The effect of these alterations on the metabolic activity and diseases remains to be further explained.

Publication types

  • Comparative Study

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Base Sequence
  • Codon
  • Extracellular Space / enzymology
  • Female
  • Gene Frequency
  • Genetic Testing*
  • Genetic Variation
  • Humans
  • Italy
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Mutation*
  • Mutation, Missense
  • Point Mutation
  • Sequence Analysis, DNA
  • Superoxide Dismutase / chemistry
  • Superoxide Dismutase / genetics*

Substances

  • Codon
  • Superoxide Dismutase