TABLE 4

Transcriptome analysis

GeneLog2 fold changeLog CPMp-valueFalse discovery rate
HSPA7−6.67456342.943577662.8625E−564.325E−52
CCL26−4.00228541.533696844.5982E−363.4737E−32
RN7SKP48−8.40631780.000541654.2481E−342.1395E−30
ARC−6.03596912.804384031.3802E−295.2134E−26
ANKRD1−3.56122322.002652711.2001E−173.6264E−14
CRYAB−1.45609177.699680711.2704E−153.199E−12
HSPA6−6.11198425.602056491.0489E−142.264E−11
VTRNA1-3−5.06541912.215689858.9014E−131.6811E−09
SPP1−2.81756040.804697663.4552E−125.8005E−09
HSPA1B−3.2911328.250913461.2859E−101.9428E−07
XIRP1−4.36440870.398292874.8336E−106.6391E−07
NEFM−2.84943592.863733749.6932E−101.2205E−06
FOSB−2.32397352.725224392.473E−092.8742E−06
RRAD−2.24806854.464133785.0727E−095.4745E−06
HSPA1A−2.53106168.456203372.8287E−082.8492E−05
IL1RL1−2.29920641.980266786.8739E−086.4911E−05
RASD1−2.24174131.638169098.5819E−087.6273E−05
VTRNA1-2−4.21520042.376997572.3762E−070.00019946
IL160.92706273.36881193.1214E−070.00024822
SPON10.760878635.630370041.4456E−060.00109207
COL15A11.01534016.868063051.5531E−060.00111743
RP11-96K19.4−2.3607353−0.56956761.8955E−060.0012725
ABCA80.68217614.631396621.9371E−060.0012725
HIST1H2BK−0.72494944.908314682.3208E−060.00146106
HBEGF−1.02626062.65120042.5521E−060.00150211
UPP1−0.62186944.658829242.5849E−060.00150211
MASP10.818182367.054870739.1183E−060.00510251
C1RL0.444464625.419314331.1084E−050.00598114
DUSP5−0.49017464.668639711.2827E−050.00668276
TNXB0.575157645.548316791.3871E−050.00698593
THBD−0.59487585.01213932.0903E−050.01018796
ADAMTS80.797245545.511751952.3182E−050.01065668
MXRA50.628490277.086067782.3276E−050.01065668
DUSP1−0.77884367.045794312.7687E−050.01230367
MMP12−2.22232193.627494862.9065E−050.01254702
SLITRK60.8927115.728166473.1127E−050.01306376
LINC00324−2.24477180.416861913.659E−050.01494156
PLXDC20.520429515.751715294.2403E−050.01685985
ABCA60.70349623.445385564.5537E−050.01764146
RP11-64B16.2−2.7001276−0.35508564.9958E−050.01887036
LAMA40.626525218.743910965.2261E−050.01925895
VTRNA2-1−5.27696760.228350685.4686E−050.01928778
METTL7A0.471473545.27579735.4893E−050.01928778
LCE3D−1.29488251.285282925.8792E−050.02018826
WISP10.8230693.563873896.5606E−050.02183693
LCE3E−1.27850481.16499566.6483E−050.02183693
GADD45B−1.29090765.872488697.0692E−050.02272509
RGS16−1.37959210.160219768.2909E−050.02609742
RP11-367F23.2−2.50757310.327414358.6844E−050.026778
AF131217.10.516168644.247167429.5197E−050.02876658

CPM: counts per million. Nine primary epithelial cell isolates obtained before and after experimental bronchial thermoplasty were exposed to 37°C versus 65°C and next-generation sequencing was performed as described in the Methods section. Transcripts with the highest fold change between groups are shown at the top of the table. p-values have been adjusted using the Benjamini–Hochberg false discovery rate to correct for multiple testing.