SNP# | Position bp¶ | Gene | Location | MAF | ETS unexposed (1) | ETS exposed (2) | FBAT homogeneity test between (1) and (2) | Umbach–Weinberg interaction testƒ | |||||||
n+ | Z | p | n+ | Z | p | χ2§ | p | n## | Z | p | |||||
rs7225157 | 11680785 | DNAH9 | Intron | 0.17 | 39 | −2.66 | 0.008 | 52 | 2.09 | 0.037 | 11.22 | 0.0008 | 188 | 3.08 | 0.0016 |
rs1519255 | 12583672 | MYOCD | Intron | 0.13 | 28 | 3.12 | 0.002 | 35 | 0.91 | 0.362 | 8.31 | 0.0040 | 189 | −2.07 | 0.0356 |
rs1233855 | 12613063 | MYOCD | Intron | 0.25 | 37 | 2.95 | 0.003 | 60 | 0.62 | 0.537 | 6.84 | 0.0089 | |||
rs9905908 | 12655081 | MYOCD | Intron | 0.40 | 45 | 3.03 | 0.002 | 61 | −0.32 | 0.748 | 6.30 | 0.0120 | |||
rs2323052 | 13780923 | COX10 | Flanking 5′ UTR | 0.07 | 29 | −2.72 | 0.007 | 23 | 0.25 | 0.803 | 2.79 | 0.0947 | |||
rs6502310 | 13784815 | COX10 | Flanking 5′ UTR | 0.09 | 34 | −2.68 | 0.007 | 32 | 0.52 | 0.600 | 4.01 | 0.0452 | |||
rs4792411 | 13797101 | COX10 | Flanking 5′ UTR | 0.10 | 28 | −2.89 | 0.004 | 34 | 1.19 | 0.236 | 7.21 | 0.0072 | |||
rs9891555 | 14239843 | HS3ST3B1 | Intron | 0.32 | 46 | 3.06 | 0.002 | 69 | −2.11 | 0.035 | 1.09 | 0.2954 | |||
rs3785655 | 14249167 | HS3ST3B1 | 3′ UTR | 0.39 | 50 | −2.96 | 0.003 | 64 | −0.75 | 0.455 | 2.44 | 0.1185 | |||
rs11652573 | 14542140 | FLJ45831 | Flanking 3′ UTR | 0.08 | 22 | 2.76 | 0.006 | 29 | −1.07 | 0.285 | 7.66 | 0.0057 | |||
rs11649913 | 14547787 | FLJ45831 | Flanking 3′ UTR | 0.26 | 40 | 3.16 | 0.002 | 58 | 1.61 | 0.108 | 1.57 | 0.2102 | |||
rs6502405 | 14834158 | FLJ45831 | Flanking 5′ UTR | 0.39 | 44 | 2.57 | 0.010 | 66 | −0.33 | 0.742 | 4.50 | 0.0339 | |||
rs12942402 | 15371906 | FLJ36674 | Flanking 5′ UTR | 0.26 | 48 | 2.69 | 0.007 | 60 | −0.75 | 0.451 | 5.48 | 0.0192 | |||
rs1971043 | 20043515 | SPECC1 | Flanking 5′ UTR | 0.16 | 33 | −2.97 | 0.003 | 51 | −2.31 | 0.021 | 0.04 | 0.8358 | |||
rs7209889 | 20217122 | SPECC1 | Flanking 3′ UTR | 0.15 | 32 | −2.75 | 0.006 | 49 | −1.72 | 0.086 | −0.15 | ||||
rs4473257 | 20823268 | MGC87631 | Flanking 5′ UTR | 0.26 | 44 | 2.60 | 0.009 | 58 | 0.43 | 0.665 | 2.58 | 0.1085 |
SNP: single nucleotide polymorphism; MAF: minor allele frequency; FBAT: family-based association test; UTR: untranslated region. #: all SNPs showing p≤0.01 with FBAT in unexposed siblings; ¶: dbSNP (build 37.1); +: number of informative families for FBAT; §: Chi-squared test (1 degree of freedom); ƒ: applied only to SNPs reaching or being close to the significance level of interaction (p≤3×10−3) with the FBAT homogeneity test; ##: number of siblings (only one per family using the Umbach–Weinberg method).